The datatype you are using does not define a split method. Are you working with our in-progress gz type or fastqillumina?
John Duddy Sr. Staff Software Engineer Illumina, Inc. 9885 Towne Centre Drive San Diego, CA 92121 Tel: 858-736-3584 E-mail: jduddy@illumina.commailto:jduddy@illumina.com
From: Chorny, Ilya Sent: Wednesday, November 02, 2011 11:50 AM To: Duddy, John Cc: Nate Coraor (nate@bx.psu.edu); galaxy-dev@lists.bx.psu.edu Subject: Looks like actual user breaks splitting
Hey John,
Any thoughts?
Ilya
Traceback (most recent call last): File "/home/galaxy/ichorny/galaxy-central/lib/galaxy/jobs/runners/tasks.py", line 73, in run_job tasks = splitter.do_split(job_wrapper) File "/home/galaxy/ichorny/galaxy-central/lib/galaxy/jobs/splitters/multi.py", line 73, in do_split input_type.split(input_datasets, get_new_working_directory_name, parallel_settings) File "/home/galaxy/ichorny/galaxy-central/lib/galaxy/datatypes/data.py", line 473, in split raise Exception("Text file splitting does not support multiple files") Exception: Text file splitting does not support multiple files
Ilya Chorny Ph.D. Bioinformatics Scientist I Illumina, Inc. 9885 Towne Centre Drive San Diego, CA 92121 Work: 858.202.4582 Email: ichorny@illumina.commailto:ichorny@illumina.com Website: www.illumina.comhttp://www.illumina.com