When we try to save a large file from galaxy (local instance) we get the following. Server should have plenty of resources. Cheers Dennis MemoryError: out of memory clear this clear this URL: http://genome.imb.qfab.org:8080/datasets/3197f0f893217878/display?to_ext=fas... Module weberror.evalexception.middleware:364 in respond view << try: __traceback_supplement__ = errormiddleware.Supplement, self, environ app_iter = self.application(environ, detect_start_response) try: return_iter = list(app_iter)>> app_iter = self.application(environ, detect_start_response) Module paste.debug.prints:98 in __call__ view << try: status, headers, body = wsgilib.intercept_output( environ, self.app) if status is None: # Some error occurred>> environ, self.app) Module paste.wsgilib:544 in intercept_output view << try: for item in app_iter: output.write(item) finally: if hasattr(app_iter, 'close'):>> output.write(item) MemoryError: out of memory URL: http://genome.imb.qfab.org:8080/datasets/3197f0f893217878/display?to_ext=fas... '/home/d.gascoigne/Galaxy/galaxy-dist/eggs/WebError-0.8a-py2.6.egg/weberror/evalexception/middleware.py', line 364 in respond app_iter = self.application(environ, detect_start_response) File '/home/d.gascoigne/Galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/debug/prints.py', line 98 in __call__ environ, self.app) File '/home/d.gascoigne/Galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/wsgilib.py', line 544 in intercept_output output.write(item) MemoryError: out of memory <?xml version="1.0" ?> <traceback> <sysinfo> <language version="2.6.1"> Python </language> </sysinfo> <stack> <frame> <module> weberror.evalexception.middleware </module> <filename> /home/d.gascoigne/Galaxy/galaxy-dist/eggs/WebError-0.8a-py2.6.egg/weberror/evalexception/middleware.py </filename> <line> 364 </line> <function> respond </function> <operation> app_iter = self.application(environ, detect_start_response) </operation> <operation_context> try: __traceback_supplement__ = errormiddleware.Supplement, self, environ app_iter = self.application(environ, detect_start_response) try: return_iter = list(app_iter) </operation_context> </frame> <frame> <module> paste.debug.prints </module> <filename> /home/d.gascoigne/Galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/debug/prints.py </filename> <line> 98 </line> <function> __call__ </function> <operation> environ, self.app) </operation> <operation_context> try: status, headers, body = wsgilib.intercept_output( environ, self.app) if status is None: # Some error occurred </operation_context> </frame> <frame> <module> paste.wsgilib </module> <filename> /home/d.gascoigne/Galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/wsgilib.py </filename> <line> 544 </line> <function> intercept_output </function> <operation> output.write(item) </operation> <operation_context> try: for item in app_iter: output.write(item) finally: if hasattr(app_iter, 'close'): </operation_context> </frame> </stack> <exception> <type> MemoryError </type> <value> out of memory </value> </exception> </traceback> <?xml version="1.0" ?> <traceback> <sysinfo> <language version="2.6.1"> Python </language> </sysinfo> <stack> <frame> <module> weberror.evalexception.middleware </module> <filename> /home/d.gascoigne/Galaxy/galaxy-dist/eggs/WebError-0.8a-py2.6.egg/weberror/evalexception/middleware.py </filename> <line> 364 </line> <function> respond </function> <operation> app_iter = self.application(environ, detect_start_response) </operation> <operation_context> try: __traceback_supplement__ = errormiddleware.Supplement, self, environ app_iter = self.application(environ, detect_start_response) try: return_iter = list(app_iter) </operation_context> </frame> <frame> <module> paste.debug.prints </module> <filename> /home/d.gascoigne/Galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/debug/prints.py </filename> <line> 98 </line> <function> __call__ </function> <operation> environ, self.app) </operation> <operation_context> try: status, headers, body = wsgilib.intercept_output( environ, self.app) if status is None: # Some error occurred </operation_context> </frame> <frame> <module> paste.wsgilib </module> <filename> /home/d.gascoigne/Galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/wsgilib.py </filename> <line> 544 </line> <function> intercept_output </function> <operation> output.write(item) </operation> <operation_context> try: for item in app_iter: output.write(item) finally: if hasattr(app_iter, 'close'): </operation_context> </frame> </stack> <exception> <type> MemoryError </type> <value> out of memory </value> </exception> </traceback> -- Dennis Gascoigne 0407 639 995 dennis.gascoigne@gmail.com