1 Feb
2012
1 Feb
'12
6:33 p.m.
Hi all.
I am analysing paired end chip-seq samples. With single end reads I have seen people extend reads by an inferred insert size and then create coverage files in wig format.
I was wondering if there are any tools available for paired end data that will create a coverage file by looking at properly mapped paired ends in a bam file and extending coverage across the distance between them.
Thanks Shaun Webb
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