details: http://www.bx.psu.edu/hg/galaxy/rev/feec758a8774 changeset: 2802:feec758a8774 user: Greg Von Kuster greg@bx.psu.edu date: Wed Sep 30 08:28:31 2009 -0400 description: Functional test fixes for uploading and sniffing metadata - not sure when the behavior for these changed.
1 file(s) affected in this change:
test/functional/test_sniffing_and_metadata_settings.py
diffs (48 lines):
diff -r 22addc979108 -r feec758a8774 test/functional/test_sniffing_and_metadata_settings.py --- a/test/functional/test_sniffing_and_metadata_settings.py Wed Sep 30 05:16:17 2009 -0400 +++ b/test/functional/test_sniffing_and_metadata_settings.py Wed Sep 30 08:28:31 2009 -0400 @@ -32,7 +32,7 @@ self.check_metadata_for_string( 'value="1.bed" value="?"' ) self.check_metadata_for_string( 'Chrom column: <option value="1" selected> Start column: <option value="2" selected>' ) self.check_metadata_for_string( 'End column: <option value="3" selected> Strand column <option value="6" selected>' ) - self.check_metadata_for_string( 'Convert to new format <option value="bed">Genomic Intervals To BED <option value="gff">BED to GFF' ) + self.check_metadata_for_string( 'Convert to new format value="bed">Convert Genomic Intervals To BED <option value="gff">Convert BED to GFF' ) self.check_metadata_for_string( 'Change data type selected value="bed" selected="yes"' ) latest_hda = galaxy.model.HistoryDatasetAssociation.query() \ .order_by( desc( galaxy.model.HistoryDatasetAssociation.table.c.create_time ) ).first() @@ -97,7 +97,7 @@ self.verify_dataset_correctness( '5.gff' ) self.check_history_for_string( '5.gff format: <span class="gff">gff</span>, database: ? Info: uploaded file' ) self.check_metadata_for_string( 'value="5.gff" value="?"' ) - self.check_metadata_for_string( 'Convert to new format <option value="bed">GFF to BED' ) + self.check_metadata_for_string( 'Convert to new format <option value="bed">Convert GFF to BED' ) self.check_metadata_for_string( 'Change data type selected value="gff" selected="yes"' ) latest_hda = galaxy.model.HistoryDatasetAssociation.query() \ .order_by( desc( galaxy.model.HistoryDatasetAssociation.table.c.create_time ) ).first() @@ -110,7 +110,7 @@ self.verify_dataset_correctness( '5.gff3' ) self.check_history_for_string( '5.gff3 format: <span class="gff3">gff3</span>, database: ? Info: uploaded file' ) self.check_metadata_for_string( 'value="5.gff3" value="?"' ) - self.check_metadata_for_string( 'Convert to new format <option value="bed">GFF to BED' ) + self.check_metadata_for_string( 'Convert to new format <option value="bed">Convert GFF to BED' ) self.check_metadata_for_string( 'Change data type selected value="gff3" selected="yes"' ) latest_hda = galaxy.model.HistoryDatasetAssociation.query() \ .order_by( desc( galaxy.model.HistoryDatasetAssociation.table.c.create_time ) ).first() @@ -138,7 +138,7 @@ self.check_metadata_for_string( 'value="1.interval" value="?"' ) self.check_metadata_for_string( 'Chrom column: <option value="1" selected> Start column: <option value="2" selected>' ) self.check_metadata_for_string( 'End column: <option value="3" selected> Strand column <option value="6" selected>' ) - self.check_metadata_for_string( 'Convert to new format <option value="bed">Genomic Intervals To BED' ) + self.check_metadata_for_string( 'Convert to new format <option value="bed">Convert Genomic Intervals To BED' ) self.check_metadata_for_string( 'Change data type selected value="interval" selected="yes"' ) latest_hda = galaxy.model.HistoryDatasetAssociation.query() \ .order_by( desc( galaxy.model.HistoryDatasetAssociation.table.c.create_time ) ).first() @@ -163,7 +163,7 @@ self.verify_dataset_correctness( '3.maf' ) self.check_history_for_string( '3.maf format: <span class="maf">maf</span>, database: ? Info: uploaded file' ) self.check_metadata_for_string( 'value="3.maf" value="?"' ) - self.check_metadata_for_string( 'Convert to new format <option value="interval">MAF to Genomic Intervals <option value="fasta">MAF to Fasta' ) + self.check_metadata_for_string( 'Convert to new format <option value="interval">Convert MAF to Genomic Intervals <option value="fasta">Convert MAF to Fasta' ) self.check_metadata_for_string( 'Change data type selected value="maf" selected="yes"' ) latest_hda = galaxy.model.HistoryDatasetAssociation.query() \ .order_by( desc( galaxy.model.HistoryDatasetAssociation.table.c.create_time ) ).first()