On Wed, Apr 24, 2013 at 5:05 PM, Iry Witham Iry.Witham@jax.org wrote:
Hi Team,
I am trying to get GATK tools added to my cloud instance and keep getting the following error: [Errno 2] No such file or directory: '/mnt/galaxyData/tmp/tmpszWRLP/GenomeAnalysisTKLite-2.3-9-gdcdccbb/GenomeAnalysisTK.jar'. Then when I try to install it again I get the following: All selected tool dependencies are already installed. I also get the following error: Initializing repository installation failed.
Thanks,
Iry
Did you solve this Iry?
I'm seeing the same "Initializing repository installation failed" error intermediately myself, for instance with package_freetype_2_4 just now - I'm unclear if this was a false alarm or not. I am currently deinstalling/reinstalling things.
Peter