23 Aug
2011
23 Aug
'11
3:10 p.m.
Is there any good reason why Galaxy can't use a more recent version of samtools? The only difference I can see is the mpileup command. The algorithm by which mpileup finds SNPs is a little different. Does anyone know if the file format has changed? The only files that need to change are sam_pileup.py and sam_pileup.xml.
David Hoover Helix Systems Staff http://helix.nih.gov