Re: [galaxy-dev] Possible to re-use toolconfig xml files outside Galaxy?

Hi Alex,

Much thanks for your input.

On 07/13/2011 02:31 PM, Bossers, Alex wrote:

as far as the xml goes. Yes it usually is accompanied by a py perl or bash script. However you could extract at least the user configurable options to gather input/output and setting parameters from the definition in the xml.

Well, I'm just afraid that in too many occations, the input param flags and order for the accompanying (py/sh/perl) script might not be identical to the command line tool itself (or do the toolconfig generally avoid changing the flags and their order?).

Best // Samuel