Hi Jochen
try starting docker with:
docker run -i -t -p 8080:80 -v E:\galaxy_storage:/export/ bgruening/galaxy-stable /bin/bash
This will provide an interactive session. You can then start Galaxy (and other stuff like the required PostgreSQL server) with
startup > log 2>&1 &
and have access to the container.
with regard to using the '-v' option: are you using the native docker for Windows or are you using the docker tool box?
Regards, Hans-Rudolf
On 08/30/2016 10:07 PM, Jochen Bick wrote:
Hi,
I am on the way to set up a Docker container on win 10. My problem is that I do not often work on win 10. My idea is to set up a galaxy which can be uses once in a while if needed and will be shutdown or not started if not needed: So I am interested in exporting all datasets including the database. In addition I would like to install tools from the toolshed which will be kept after restarting the docker.
So ware I did the following: docker run -d -p 8080:80 -v E:\galaxy_storage:/export/ bgruening/galaxy-stable
its running but there are no files appearing at E:\galaxy_storage\
is it also possible to modify the galaxy.ini?
or to ssh to the docker container?
Thanks in advance Jochen ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/
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