Is this the right spot for this question? Or is it better to ask elsewhere?
On Mon, 13 May 2019 at 09:50, Eric Kuyt erickuyt@gmail.com wrote:
Hey all,
I have a question about the samtools_slice_bam tool in the samtools suite.
It seems the references variable remains empty after re-detecting metadata. I now tried sorting the bam in galaxy and manually in samtools, but no references coming up.
I also ran a breakpoint in the binary.Bam.set_meta but it doesn't seem to be catched.
Any ideas? Thx.
Eric