details: http://www.bx.psu.edu/hg/galaxy/rev/8d77e3acf653 changeset: 3423:8d77e3acf653 user: Greg Von Kuster greg@bx.psu.edu date: Mon Feb 22 09:21:42 2010 -0500 description: Fix for displaying datasets in the bx browser.
diffstat:
lib/galaxy/datatypes/interval.py | 2 +- lib/galaxy/datatypes/tabular.py | 2 -- 2 files changed, 1 insertions(+), 3 deletions(-)
diffs (24 lines):
diff -r 94741c94de0a -r 8d77e3acf653 lib/galaxy/datatypes/interval.py --- a/lib/galaxy/datatypes/interval.py Mon Feb 22 08:12:03 2010 -0500 +++ b/lib/galaxy/datatypes/interval.py Mon Feb 22 09:21:42 2010 -0500 @@ -54,7 +54,7 @@ """Initialize interval datatype, by adding UCSC display apps""" Tabular.__init__(self, **kwd) self.add_display_app ( 'ucsc', 'display at UCSC', 'as_ucsc_display_file', 'ucsc_links' ) - self.add_display_app ( 'main', 'BX', 'as_bx_display_file', 'bx_links' ) + self.add_display_app ( 'main', 'BX', 'as_ucsc_display_file', 'bx_links' )
def init_meta( self, dataset, copy_from=None ): Tabular.init_meta( self, dataset, copy_from=copy_from ) diff -r 94741c94de0a -r 8d77e3acf653 lib/galaxy/datatypes/tabular.py --- a/lib/galaxy/datatypes/tabular.py Mon Feb 22 08:12:03 2010 -0500 +++ b/lib/galaxy/datatypes/tabular.py Mon Feb 22 09:21:42 2010 -0500 @@ -214,8 +214,6 @@ return open( dataset.file_name ) def as_ucsc_display_file( self, dataset, **kwd ): return open( dataset.file_name ) - def as_bx_display_file( self, dataset, **kwd ): - return open( dataset.file_name )
class Taxonomy( Tabular ): def __init__(self, **kwd):