Re: [galaxy-dev] stdout and stderr while using pbs

shashi shekhar wrote:

Hi All,

if i am using pbs . in this i am getting stderror and stdout . then how can i handle such type of problem. can i check the standard error before displaying anything on browser.

Hi Shashi,

There's no difference when running via PBS or locally in this regard. If you need to capture stderr to prevent it from causing a failure, please see this page:

https://bitbucket.org/galaxy/galaxy-central/wiki/Job_failure_when_stderr

--nate

Reagrds shashi shekhar

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