Hi, I am testing Basic Protocol 1 on my local galaxy instance. But Join didn't work. What did I do wrong? I installed join from galaxy main tool shed, bx_python_0_7 was installed but with installation Status "missing tool dependencies".
Thanks. ----------------------------------------------------------------------------- job id: 49 tool id: toolshed.g2.bx.psu.edu/repos/devteam/join/gops_join_1/1.0.0http://toolshed.g2.bx.psu.edu/repos/devteam/join/gops_join_1/1.0.0 tool version: 1.0.0 job pid or drm id: 46018 job tool version: ----------------------------------------------------------------------------- job command line: python /home/galaxy/shed_tools/toolshed.g2.bx.psu.edu/repos/devteam/join/de21bdbb8d28/join/gops_join.pyhttp://toolshed.g2.bx.psu.edu/repos/devteam/join/de21bdbb8d28/join/gops_join.py/local/galaxy/database/files/000/dataset_45.dat /local/galaxy/database/files/000/dataset_46.dat /local/galaxy/database/files/000/dataset_50.dat -1 1,2,3,6 -2 1,2,3,6 -m 1 -f none ----------------------------------------------------------------------------- job stderr: Traceback (most recent call last): File "/home/galaxy/shed_tools/toolshed.g2.bx.psu.edu/repos/devteam/join/de21bdbb8d28/join/gops_join.pyhttp://toolshed.g2.bx.psu.edu/repos/devteam/join/de21bdbb8d28/join/gops_join.py", line 13, in <module> from bx.intervals import * ImportError: No module named bx.intervals
Cheers, Yu
di29her wang@lrz.demailto:wang@lrz.de