1 Oct
2010
1 Oct
'10
8:51 a.m.
On Tue, Sep 28, 2010 at 4:52 PM, Peter <peter@maubp.freeserve.co.uk> wrote:
Creating (small) databases from FASTA files seems potentially useful (i.e. wrapping the BLAST+ tool makeblastdb which replaces formatdb) but as these are made up of several files I need to know more about how Galaxy works before tackling that.
Alternatively, the BLAST+ feature of FASTA file verses FASTA file could be handy (using -subject instead of -db). I think I can see how to handle this... but it would complicate supporting other parameters.
I've done the later now, http://bitbucket.org/peterjc/galaxy-central/changeset/17b2cb598b5e Peter