On Tue, Sep 28, 2010 at 4:52 PM, Peter <peter(a)maubp.freeserve.co.uk> wrote:
Creating (small) databases from FASTA files seems potentially useful
(i.e. wrapping the BLAST+ tool makeblastdb which replaces formatdb)
but as these are made up of several files I need to know more about
how Galaxy works before tackling that.
Alternatively, the BLAST+ feature of FASTA file verses FASTA file
could be handy (using -subject instead of -db). I think I can see how
to handle this... but it would complicate supporting other parameters.
I've done the later now,