- It needs to be a tab not spaces between the fields in that loc file - can you confirm that it is a tab? (Many editors will implicitly replace tabs with spaces.) - You need to restart Galaxy after updating that file - can you confirm it has been restarted?
-John
On Fri, Jul 22, 2016 at 11:34 AM, Alexandre Maucuer alexandre.maucuer@inserm.fr wrote:
Hi, I've installed a Galaxy instance on a local machine under ubuntu 16.04. I am trying to fetch sequences from hg19.2bit I downloaded from ucsc as ~/galaxy/depot/data2/galaxy/hg19$hg19.bit I added: hg19 /depot/data2/galaxy/hg19/hg19.2bit to my twobit.loc file in tool-data directory
When running the extract genomic dna, I get the error: "No sequences are available for 'hg19', request them by reporting this error." see also attached screenshot Thanks in advance for your help
-- Alexandre Maucuer, Ph.D., INSERM, France
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