Dear all,
For anyone using my Blast2GO for pipelines wrapper: http://toolshed.g2.bx.psu.edu/view/peterjc/blast2go
The newly uploaded v0.0.6 of the wrapper changes from supporting b2g4pipe v2.3.5 to supporting v2.5 instead. This is currently available here (while the old v2.3.5 release does not appear to be online any more): http://www.blast2go.com/data/blast2go/b2g4pipe_v2.5.zip
Previously by default the wrapper looked for b2g4pipe v2.3.5 under location /opt/b2g4pipe/blast2go.jar
It will now by default expect b24pipe v2.5 under location /opt/b2g4pipe_v2.5/blast2go.jar instead (changed so you can have both on disk at the same time during migration).
Please also note that the blast2go.loc file will need to be updated to point at the updated property files. The Blast2GO property files define both the database location (e.g. the public database in Spain or your own local database) and other configurable options which have changed from v2.3.5 to v2.5. Please read the blast2go.loc.sample for details.
If you need any guidance on this, I will try to advise by email, and make clarifications to the documentation if required.
Regards,
Peter