Somehow I seem to miss something when configuring our latest up-to-date galaxy_central version to use the galaxy toolshed. When as admin I want to install a tool I can browse the given 2 repositories and select view tools. When I select install to local galaxy it drops an error on 2 tools I tested thus far: --------------------------- Error Traceback: View as: Interactive | Text | XML (full) ⇝ AttributeError: 'ToolSectionLabel' object has no attribute 'name' URL: http://galaxy02:8080/galaxy/admin_toolshed/install_repository?tool_shed_url=http://toolshed.g2.bx.psu.edu&repo_info_dict=293ac398f098023d041933b74935d0b4771444a6:7b22636f646f6e6c6f676f223a205b22436f646f6e2062617365642073657175656e6365206c6f676f2067656e657261746f722e222c2022687474703a2f2f746f6f6c736865642e67322e62782e7073752e6564752f7265706f732f64617669646d75727068792f636f646f6e6c6f676f222c2022323037313634353062653837225d7d&includes_tools=True Module weberror.evalexception.middleware:364 in respond view
app_iter = self.application(environ, detect_start_response) Module paste.debug.prints:98 in __call__ view environ, self.app) Module paste.wsgilib:539 in intercept_output view app_iter = application(environ, replacement_start_response) Module paste.recursive:80 in __call__ view return self.application(environ, start_response) Module paste.httpexceptions:632 in __call__ view return self.application(environ, start_response) Module galaxy.web.framework.base:160 in __call__ view body = method( trans, **kwargs ) Module galaxy.web.framework:173 in decorator view return func( self, trans, *args, **kwargs ) Module galaxy.web.controllers.admin_toolshed:322 in install_repository view tool_panel_section_select_field = build_tool_panel_section_select_field( trans ) Module galaxy.web.controllers.admin_toolshed:804 in build_tool_panel_section_select_field view options.append( ( tool_section.name, tool_section.id ) ) AttributeError: 'ToolSectionLabel' object has no attribute 'name'
The steps I took: Updated the universe to load the extra shed_tool_conf.xml file. Set the toolpath to "../toolshedtools" in shed_tool_conf.xml Gave the directory read write permissions for galaxy user:dev_group Restarted galaxy. Any additional configs to make somewhere? In the original tool_conf.xml file? Alex