Hmm, I must have some sort of other logic error which is preventing the detection of the format. Thanks for the information!
On Wed, Jun 29, 2016 at 10:24 AM, Peter Cock p.j.a.cock@googlemail.com wrote:
Have you invented your own file format, or are you using an existing file format defined within Galaxy?
The Galaxy file formats with automatic detection are all defined via Python classes which define a sniff method.
Peter
On Wed, Jun 29, 2016 at 3:15 PM, Katherine Beaulieu katherine.beaulieu014@gmail.com wrote:
Hi everyone, I am looking to auto-detect the file format of a file outputted by a
python
tool I have written. Does anyone have any idea how to do this? I have
tried
setting the format attribute to "auto" with no luck. Let me know if you would like to see my tool config file. Cheers, Katherine
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