On Thu, Oct 11, 2012 at 6:14 PM, Jim Johnson <johns198(a)umn.edu> wrote:
Checking to see if there is any interest in including a parameter
select outputs for cuffdiff,
potentially including a composite output and a cummeRbund sqlite database.
I'm highly interested in something like this, I even tried in the past
to come up with a solution, but I gave up when I was hit hard by
the complexity of the current cuffdiff output you talk about it. I
think your solution sounds great and I will make sure to test your
demo code as soon as possible.