Hi,
We have a test galaxy instance integrated with our SGE cluster. The filesystem is shared in the galaxy server and all the cluster compute nodes. Now we are submitting all the jobs as galaxy user and all the data is stored in the home folder for galaxy user.
We plan to configure galaxy to submit the jobs to SGE as the real user as explained in docs https://wiki.galaxyproject.org/Admin/Config/Performance/Cluster#Submitting_J... and we would like that each user store their galaxy data in their personal home folder and not in the galaxy user home folder so each user can keep their private data not accesible to other users in the cluster and also to be able to do proper accounting of how much storage each user is using. Our main concern is about users keeping their data private, the storage usage accounting is something that would be nice but it's not so critical.
Is this setup possible? Any advice or documentation about how to achieve this setup?
thanks in advance for any help or suggestion. regards, Pablo.