Yes, A simple example is in the filter/sorter.xml and pasteWrapper tool_config. Basically by the metadata_source in sorter:
<outputs> <data format="input" name="out_file1" metadata_source="input"/> </outputs>
A format example in the tools/filter/pasteWrapper.xml where you use conditionals:
<outputs> <data format="input" name="out_file1" metadata_source="input1"> <change_format> <when input_dataset="input1" attribute="ext" value="bed" format="interval"/> </change_format> </data> </outputs>
Hope this helped,
Alex
-----Oorspronkelijk bericht----- Van: galaxy-dev-bounces@lists.bx.psu.edu [mailto:galaxy-dev-bounces@lists.bx.psu.edu] Namens Zhe Chen Verzonden: dinsdag 19 oktober 2010 0:48 Aan: galaxy-dev@bx.psu.edu Onderwerp: [galaxy-dev] Dynamic output format
Hi,
Can the format of a tool's "output" be dynamic according to the user's input?
See example below, when user chose fasta, let the output format be fasta, when user choose table, let the output format be tabular.
<input> <param name="outputFormat" type="select" label="Select output format"> <option value="fasta" selected="true">Fasta</option> <option value="table">Table</option> <option value="mase">Mase/IG</option> <option value="pretty">Pretty print</option> <option value="outali">Output aligned</option> <option value="clustal">Clustal</option> <option value="phylipi">Phylip interleaved</option> <option value="phylips">Phylip sequential</option> <option value="msf">MSF</option> <option value="rsf">RSF</option> <option value="megai">MEGA interleaved</option> <option value="megas">MEGA sequential</option> <option value="slx">SLX</option> <option value="gde">GDE</option> <option value="GDEFlat">GDEflat</option> <option value="stockholm">Stockholm</option> <option value="nexusi">Nexus interleaved</option> <option value="nexuss">Nexus sequential</option> <option value="pir">PIR/NBRF</option> <option value="gcg">GCG</option> <option value="raw">Raw</option> </param> </input>
<outputs> <data name="output" format="tabular"/> </outputs>
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