Hello there
I am working on getting galaxy to work with the slurm queuing system. I think i have solved the slurm part of the problem (submit, status, running etc), but some local problems still exist. Our site is using the modules system (http://modules.sourceforge.net/) to handle software, and there are some kinks to work out with that, but as far as i can see, the slurm is working.
It is still a work in progress, but i think it could be useful for other people who are trying to do the same thing. All the adaptations are at the moment very specific for our site, but I hope to make it possible to integrate it with the vanilla galaxy.
I have a short description of what i have done at this blog:
https://www.uppnex.uu.se/blog/26/galaxy-uppmax
A bitbucket for the code can be found here:
https://bitbucket.org/dahlo/galaxy-central
Best regards Martin Dahlö --- Bioinformatic support martin.dahlo@scilifelab.uu.se
+46 18 611 59 59 +46 706 70 79 55 http://www.scilifelab.uu.se/ http://www.uppnex.uu.se ---