details: http://www.bx.psu.edu/hg/galaxy/rev/31150f0b216d changeset: 2632:31150f0b216d user: jeremy goecks jeremy.goecks@emory.edu date: Fri Aug 28 12:52:43 2009 -0400 description: Added documentation and exception handling for mysql index error.
1 file(s) affected in this change:
lib/galaxy/model/migrate/versions/0015_tagging.py
diffs (98 lines):
diff -r 4b4bac1f66bd -r 31150f0b216d lib/galaxy/model/migrate/versions/0015_tagging.py --- a/lib/galaxy/model/migrate/versions/0015_tagging.py Thu Aug 27 16:27:10 2009 -0400 +++ b/lib/galaxy/model/migrate/versions/0015_tagging.py Fri Aug 28 12:52:43 2009 -0400 @@ -1,3 +1,15 @@ +""" +This migration script adds the tables necessary to support tagging of histories, +datasets, and history-dataset associations (user views of datasets). + +If using mysql, this script will display the following error, which is corrected in the next +migration script: + +history_dataset_association_tag_association table failed: (OperationalError) +(1059, "Identifier name 'ix_history_dataset_association_tag_association_history_dataset_association_id' +is too long) +""" + from sqlalchemy import * from migrate import *
@@ -11,6 +23,19 @@ log = logging.getLogger( __name__ )
metadata = MetaData( migrate_engine ) + +def display_migration_details(): + print "" + print "This migration script adds the tables necessary to support tagging of histories," + print "datasets, and history-dataset associations (user views of datasets)." + print "" + print "If using mysql, this script will display the following error, which is " + print "corrected in the next migration script:" + print "history_dataset_association_tag_association table failed: " + print "(OperationalError) (1059, 'Identifier name " + print "'ix_history_dataset_association_tag_association_history_dataset_association_id'" + print "is too long)" +
# New tables to support tagging of histories, datasets, and history-dataset associations. Tag_table = Table( "tag", metadata, @@ -42,15 +67,48 @@ Column( "user_value", TrimmedString(255), index=True) )
def upgrade(): + display_migration_details() metadata.reflect() - Tag_table.create() - HistoryTagAssociation_table.create() - DatasetTagAssociation_table.create() - HistoryDatasetAssociationTagAssociation_table.create() + try: + Tag_table.create() + except Exception, e: + print str(e) + log.debug( "Creating tag table failed: %s" % str( e ) ) + try: + HistoryTagAssociation_table.create() + except Exception, e: + print str(e) + log.debug( "Creating history_tag_association table failed: %s" % str( e ) ) + try: + DatasetTagAssociation_table.create() + except Exception, e: + print str(e) + log.debug( "Creating dataset_tag_association table failed: %s" % str( e ) ) + try: + HistoryDatasetAssociationTagAssociation_table.create() + except Exception, e: + print str(e) + log.debug( "Creating history_dataset_association_tag_association table failed: %s" % str( e ) )
def downgrade(): metadata.reflect() - Tag_table.drop() - HistoryTagAssociation_table.drop() - DatasetTagAssociation_table.drop() - HistoryDatasetAssociationTagAssociation_table.drop() \ No newline at end of file + try: + Tag_table.drop() + except Exception, e: + print str(e) + log.debug( "Dropping tag table failed: %s" % str( e ) ) + try: + HistoryTagAssociation_table.drop() + except Exception, e: + print str(e) + log.debug( "Dropping history_tag_association table failed: %s" % str( e ) ) + try: + DatasetTagAssociation_table.drop() + except Exception, e: + print str(e) + log.debug( "Dropping dataset_tag_association table failed: %s" % str( e ) ) + try: + HistoryDatasetAssociationTagAssociation_table.drop() + except Exception, e: + print str(e) + log.debug( "Dropping history_dataset_association_tag_association table failed: %s" % str( e ) ) \ No newline at end of file