Devs,
I'm having issues with a local toolshed I'm playing around with.
I turned on use_remote = True (since we have that working on our primary galaxy instance). Web access to the tool shed, cloning, and pulling work fine. However, I'm getting "abort: authorization failed" when trying to "hg push".
Our webserver is seeing it OK, all the authorizations look good (first one fails with 401, so hg requests creds from me and sends those, gets 200)
X - - [30/Jan/2014:18:28:28 -0600] "GET /toolshed/repos/esr/genemarks_tools?cmd=capabilities HTTP/1.1" 401 5213 "-" "mercurial/proto-1.0" X - esr@DOMAIN [30/Jan/2014:18:28:30 -0600] "GET /toolshed/repos/esr/genemarks_tools?cmd=capabilities HTTP/1.1" 200 4893 "-" "mercurial/proto-1.0"
Everything past here is where the fun starts... those are 401s for perfectly good credentials...
X - - [30/Jan/2014:18:28:30 -0600] "GET /toolshed/repos/esr/genemarks_tools?cmd=batch HTTP/1.1" 401 730 "-" "mercurial/proto-1.0" X - esr@DOMAIN [30/Jan/2014:18:28:30 -0600] "GET /toolshed/repos/esr/genemarks_tools?cmd=batch HTTP/1.1" 200 4797 "-" "mercurial/proto-1.0" X - - [30/Jan/2014:18:28:30 -0600] "POST /toolshed/repos/esr/genemarks_tools?cmd=unbundle HTTP/1.1" 401 730 "-" "mercurial/proto-1.0" X - esr@DOMAIN [30/Jan/2014:18:28:30 -0600] "POST /toolshed/repos/esr/genemarks_tools?cmd=unbundle HTTP/1.1" 401 5175 "-" "mercurial/proto-1.0" X - esr@DOMAIN [30/Jan/2014:18:28:33 -0600] "POST /toolshed/repos/esr/genemarks_tools?cmd=unbundle HTTP/1.1" 401 5175 "-" "mercurial/proto-1.0" X - esr@DOMAIN [30/Jan/2014:18:28:33 -0600] "POST /toolshed/repos/esr/genemarks_tools?cmd=unbundle HTTP/1.1" 401 5175 "-" "mercurial/proto-1.0" X - esr@DOMAIN [30/Jan/2014:18:28:33 -0600] "POST /toolshed/repos/esr/genemarks_tools?cmd=unbundle HTTP/1.1" 401 5175 "-" "mercurial/proto-1.0" X - esr@DOMAIN [30/Jan/2014:18:28:33 -0600] "POST /toolshed/repos/esr/genemarks_tools?cmd=unbundle HTTP/1.1" 401 5175 "-" "mercurial/proto-1.0" X - esr@DOMAIN [30/Jan/2014:18:28:33 -0600] "POST /toolshed/repos/esr/genemarks_tools?cmd=unbundle HTTP/1.1" 401 5175 "-" "mercurial/proto-1.0"
And galaxy _seems_ to be seeing it OK
165.91.51.54 - - [30/Jan/2014:18:28:30 -0500] "GET /toolshed/repos/esr/genemarks_tools?cmd=capabilities HTTP/1.1" 200 130 "-" "mercurial/proto-1.0" 165.91.51.54 - - [30/Jan/2014:18:28:30 -0500] "GET /toolshed/repos/esr/genemarks_tools?cmd=batch HTTP/1.1" 200 43 "-" "mercurial/proto-1.0"
however, on my end I'm seeing:
esr:~/Projects/genemarks_tools$ hg push pushing to https://esr@fqdn/toolshed/repos/esr/genemarks_tools http authorization required realm: Galaxy Toolshed user: esr password: searching for changes http authorization required realm: hgweb in the tool shed user: esr password: abort: authorization failed
The 200 I get in response to cmd=batch isn't actually a 200. Running the same GET from the command line (GET /toolshed/repos/esr/genemarks_tools?cmd=batch) or browsing via the web I see
Galaxy was unable to successfully complete your request
URL: https://example.org/toolshed/repos/esr/genemarks_tools?cmd=batch Module galaxy.web.framework.middleware.error:*149* in |__call__| |>> https://geiger.tamu.edu/toolshed/repos/esr/genemarks_tools?cmd=batch#app_iter *=* self*.*application*(*environ*,* sr_checker*)*| Module paste.debug.prints:*106* in |__call__| |>> https://geiger.tamu.edu/toolshed/repos/esr/genemarks_tools?cmd=batch#environ*,* self*.*app*)*| Module paste.wsgilib:*543* in |intercept_output| |>> https://geiger.tamu.edu/toolshed/repos/esr/genemarks_tools?cmd=batch#app_iter *=* application*(*environ*,* replacement_start_response*)*| Module paste.recursive:*84* in |__call__| |>> https://geiger.tamu.edu/toolshed/repos/esr/genemarks_tools?cmd=batch#*return* self*.*application*(*environ*,* start_response*)*| Module galaxy.webapps.tool_shed.framework.middleware.remoteuser:*74* in |__call__| |>> https://geiger.tamu.edu/toolshed/repos/esr/genemarks_tools?cmd=batch#*return* self*.*app*(* environ*,* start_response *)*| Module paste.httpexceptions:*633* in |__call__| |>> https://geiger.tamu.edu/toolshed/repos/esr/genemarks_tools?cmd=batch#*return* self*.*application*(*environ*,* start_response*)*| Module galaxy.web.framework.base:*132* in |__call__| |>> https://geiger.tamu.edu/toolshed/repos/esr/genemarks_tools?cmd=batch#*return* self*.*handle_request*(* environ*,* start_response *)*| Module galaxy.web.framework.base:*199* in |handle_request| |>> https://geiger.tamu.edu/toolshed/repos/esr/genemarks_tools?cmd=batch#*return* body*(* environ*,* start_response *)*| Module mercurial.hgweb.request165.91.51.54:*146* in |run_wsgi| |>> https://geiger.tamu.edu/toolshed/repos/esr/genemarks_tools?cmd=batch#*return* application*(*env*,* respond*)*| Module mercurial.hgweb.hgwebdir_mod:*147* in |__call__| |>> https://geiger.tamu.edu/toolshed/repos/esr/genemarks_tools?cmd=batch#*return* self*.*run_wsgi*(*req*)*| Module mercurial.hgweb.hgwebdir_mod:*205* in |run_wsgi| |>> https://geiger.tamu.edu/toolshed/repos/esr/genemarks_tools?cmd=batch#*return* hgweb*(*repo*)**.*run_wsgi*(*req*)*| Module mercurial.hgweb.hgweb_mod:*127* in |run_wsgi| |>> https://geiger.tamu.edu/toolshed/repos/esr/genemarks_tools?cmd=batch#*return* protocol*.*call*(*self*.*repo*,* req*,* cmd*)*| Module mercurial.hgweb.protocol:*76* in |call| |>> https://geiger.tamu.edu/toolshed/repos/esr/genemarks_tools?cmd=batch#rsp *=* wireproto*.*dispatch*(*repo*,* p*,* cmd*)*| Module mercurial.wireproto:*347* in |dispatch| |>> https://geiger.tamu.edu/toolshed/repos/esr/genemarks_tools?cmd=batch#args *=* proto*.*getargs*(*spec*)*| Module mercurial.hgweb.protocol:*32* in |getargs| |>> https://geiger.tamu.edu/toolshed/repos/esr/genemarks_tools?cmd=batch#data*[*k*]* *=* knownargs*[*k*]**[**0**]*| *KeyError: 'cmds'*
Additionally, when I browse via the web/curl, I see the following in the tool_shed_webapp.log:
X - - [30/Jan/2014:19:05:33 -0500] "GET /toolshed/repos/esr/genemarks_tools?cmd=batch HTTP/1.1" 500 - "-" "Mozilla/5.0 (X11; Ubuntu; Linux i686; rv:26.0) Gecko/20100101 Firefox/26.0" Error - <type 'exceptions.KeyError'>: 'cmds'
Any ideas?
Cheers, Eric Rasche