details: http://www.bx.psu.edu/hg/galaxy/rev/dd58d5aeb274 changeset: 1539:dd58d5aeb274 user: Greg Von Kuster greg@bx.psu.edu date: Wed Oct 01 12:43:59 2008 -0400 description: Fix for root/display() - history_dataset_association.dataset_id no longer confused with history_dataset_association.id.
1 file(s) affected in this change:
lib/galaxy/web/controllers/root.py
diffs (56 lines):
diff -r f9431ad593b4 -r dd58d5aeb274 lib/galaxy/web/controllers/root.py --- a/lib/galaxy/web/controllers/root.py Wed Oct 01 10:17:58 2008 -0400 +++ b/lib/galaxy/web/controllers/root.py Wed Oct 01 12:43:59 2008 -0400 @@ -125,36 +125,37 @@ except: return "hid '%s' is invalid" %str( hid ) history = trans.get_history() - for dataset in history.datasets: - if dataset.hid == hid: - data = dataset + for hda in history.datasets: + if hda.hid == hid: + history_dataset_assoc = hda break else: - raise Exception( "No dataset with hid '%d'" % hid ) + raise Exception( "History_dataset_association with hid '%s' does not exist." % str( hid ) ) else: try: - data = self.app.model.HistoryDatasetAssociation.get( id ) + id = int( id ) + history_dataset_assoc = self.app.model.HistoryDatasetAssociation.filter_by( dataset_id=id ).first() except: - return "Dataset id '%s' is invalid" %str( id ) - if data: - mime = trans.app.datatypes_registry.get_mimetype_by_extension( data.extension.lower() ) + return "Dataset id '%s' is invalid." %str( id ) + if history_dataset_assoc: + mime = trans.app.datatypes_registry.get_mimetype_by_extension( history_dataset_assoc.extension.lower() ) trans.response.set_content_type(mime) if tofile: - fStat = os.stat(data.file_name) + fStat = os.stat(history_dataset_assoc.file_name) trans.response.headers['Content-Length'] = int(fStat.st_size) if toext[0:1] != ".": toext = "." + toext valid_chars = '.,^_-()[]0123456789abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ' - fname = data.name + fname = history_dataset_assoc.name fname = ''.join(c in valid_chars and c or '_' for c in fname)[0:150] - trans.response.headers["Content-Disposition"] = "attachment; filename=GalaxyHistoryItem-%s-[%s]%s" % (data.hid, fname, toext) - trans.log_event( "Display dataset id: %s" % str(id) ) + trans.response.headers["Content-Disposition"] = "attachment; filename=GalaxyHistoryItem-%s-[%s]%s" % (history_dataset_assoc.hid, fname, toext) + trans.log_event( "Display dataset id: '%s'." % str(id) ) try: - return open( data.file_name ) + return open( history_dataset_assoc.file_name ) except: - return "This dataset contains no content" + return "Dataset id '%s' contains no content." % str( id ) else: - return "No dataset with id '%s'" % str( id ) + return "Dataset id '%s' does not exist." % str( id )
@web.expose def display_child(self, trans, parent_id=None, designation=None, tofile=None, toext=".txt"):