details: http://www.bx.psu.edu/hg/galaxy/rev/9ed3e27a6e4c changeset: 3218:9ed3e27a6e4c user: Kanwei Li kanwei@gmail.com date: Thu Jan 07 17:52:08 2010 -0500 description: Add bam_to_bai converter
diffstat:
lib/galaxy/datatypes/converters/bam_to_bai.xml | 13 +++++++++++++ 1 files changed, 13 insertions(+), 0 deletions(-)
diffs (18 lines):
diff -r 62c7260e7fb7 -r 9ed3e27a6e4c lib/galaxy/datatypes/converters/bam_to_bai.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/lib/galaxy/datatypes/converters/bam_to_bai.xml Thu Jan 07 17:52:08 2010 -0500 @@ -0,0 +1,13 @@ +<tool id="INDEXER_Bam_Bai_0" name="Bam to Bai"> + <command>samtools index $input $output</command> + <inputs> + <page> + <param format="bam" name="input" type="data" label="Choose BAM"/> + </page> + </inputs> + <outputs> + <data format="bai" name="output"/> + </outputs> + <help> + </help> +</tool> \ No newline at end of file