I have created a ticket for this issue here (https://trello.com/c/jxqT0ndZ). When the file is in the incorrect state (extension missing from the download) - if you close out your browser tab and reopen it in a new window and try to download the file does it still exhibit the problem (indicating a client-side problem instead of a server metadata/datatype issue)? -John On Wed, Nov 19, 2014 at 7:49 AM, Lukasse, Pieter <pieter.lukasse@wur.nl> wrote:
Hi,
This issue is appearing again, after the upgrade of our Galaxy on *October the 23rd*....anyone experiencing the same?
Thanks,
Pieter.
*From:* galaxy-dev-bounces@lists.bx.psu.edu [mailto: galaxy-dev-bounces@lists.bx.psu.edu] *On Behalf Of *Lukasse, Pieter *Sent:* vrijdag 4 april 2014 10:59 *To:* Bossers, Alex; Kuijt, Eric *Cc:* galaxy-dev@lists.bx.psu.edu *Subject:* Re: [galaxy-dev] Strange issue with datatypes in Galaxy version of last week
Hi Alex, all
FYI – I’ve added the card to https://trello.com/c/ro8knsaa some time ago. Can you please vote for it?
Thanks,
Pieter.
*From:* Bossers, Alex *Sent:* dinsdag 25 maart 2014 16:52 *To:* Lukasse, Pieter *Cc:* galaxy-dev@lists.bx.psu.edu *Subject:* RE: [galaxy-dev] Strange issue with datatypes in Galaxy version of last week
Pieter,
I just experienced the same with another generic tabular .tab file output. It broke the filename at dash without any extension.
The file itself was ok, just the name.
Alex
*Van:* galaxy-dev-bounces@lists.bx.psu.edu [ mailto:galaxy-dev-bounces@lists.bx.psu.edu <galaxy-dev-bounces@lists.bx.psu.edu>] *Namens *Lukasse, Pieter *Verzonden:* dinsdag 25 maart 2014 16:33 *Aan:* galaxy-dev@lists.bx.psu.edu *Onderwerp:* [galaxy-dev] Strange issue with datatypes in Galaxy version of last week
Hi,
Apparently a new datatypes bug has been introduced in the Galaxy version of last week:
I have a tool that generates a csv file. Tool configuration is like this:
<outputs>
<data name=*"simOut"* format=*"msclust.csv"* label=*"${tool.name <http://tool.name>} on ${on_string} - SIM file"*/>
The datatypes has this entry:
<datatype extension=*"msclust.csv"* type= *"galaxy.datatypes.tabular:Tabular"* mimetype=*"text/csv"* display_in_upload=*"true"* subclass=*"true"/*>
At first Galaxy output seems fine:
But when I download the file, the downloaded file name will be : Galaxy40-[MsClust_on_data_1_-_SIM_file]-
When I go to “edit attributes” and just click “save”, then upon downloading again, the file name is correct... Galaxy40-[MsClust_on_data_1_-_SIM_file].msclust.csv .
Anyone faced this issue?
Thanks and regards,
Pieter.
Pieter Lukasse
Wageningen UR, Plant Research International
Departments of Bioscience and Bioinformatics
Wageningen Campus, Building 107, Droevendaalsesteeg 1, 6708 PB, Wageningen, the Netherlands
+31-317481122; skype: pieter.lukasse.wur
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