Dear all,
I was wondering if anybody has seen the following error after installing deeptools in the galaxy interface:
Fatal error: Exit code 1 () Traceback (most recent call last): File "/opt/galaxy/galaxy/database/dependencies/_conda/envs/__deeptools@2.5.1/bin/plotCoverage", line 4, in <module> from deeptools.plotCoverage import main File "/opt/galaxy/galaxy/database/dependencies/_conda/envs/__deeptools@2.5.1/lib/python3.6/site-packages/deeptools/plotCoverage.py", line 15, in <module> import deeptools.countReadsPerBin as countR File "/opt/galaxy/galaxy/database/dependencies/_conda/envs/__deeptools@2.5.1/lib/python3.6/site-packages/deeptools/countReadsPerBin.py", line 9, in <module> import deeptools.utilities File "/opt/galaxy/galaxy/database/dependencies/_conda/envs/__deeptools@2.5.1/lib/python3.6/site-packages/deeptools/utilities.py", line 3, in <module> import pysam File "/opt/galaxy/galaxy/database/dependencies/_conda/envs/__deeptools@2.5.1/lib/python3.6/site-packages/pysam/__init__.py", line 5, in <module> from pysam.libchtslib import * ImportError: libbz2.so.1.0: cannot open shared object file: No such file or directory
Has anybody encountered this error before and were you able to resolve it?
Thanks and best regards,
Christopher Previti