On Fri, Apr 1, 2011 at 4:10 PM, Peter Cock p.j.a.cock@googlemail.com wrote:
On Fri, Apr 1, 2011 at 3:55 PM, Kanwei Li kanwei@gmail.com wrote:
Hi Peter,
I don't see your attempt to use default in the example given. A bit more detail?
-K
Hi Kanwei,
My example tool is now here: https://bitbucket.org/peterjc/galaxy-central/changeset/198bf927ca30
As per the original email, I have three parameters which are column numbers, and I want the defaults to be columns 1, 2 and 12. However, on my Galaxy installation they all default to the first column.
I have tried giving the default values as 1, 2, and 12, and also as c1, c2 and c12 - neither works: https://bitbucket.org/peterjc/galaxy-central/changeset/374143be8e45
If you need more information, let me know.
Thanks,
Peter
P.S. Bug filed here: https://bitbucket.org/galaxy/galaxy-central/issue/507/
Trello migrated issue (where I have also commented): https://trello.com/c/6ugfcLgI/435-507-default-value-for-data-column-not-work...
Partly solved, rather than looking at the value tag it seems to look at the default_value tag instead. I consider this a bug (a needless difference from the other parameter types), but out of backward compatibility (e.g. the boxplot tool) suggest this accept either tag name? Would a patch doing that be acceptable?
Furthermore, regardless of the numerical setting, the defaults must not include the leading c (e.g. 2 rather than c2), see: https://github.com/peterjc/galaxy_blast/commit/eb9a26b21bf55266184cf00cfe692...
Regards,
Peter