I have been trying to implement galaxy-dist on our new server for days.
After adding a new tool into galaxy, a strange problem happened when I was
testing some sample data.
After clicking the execute button, new jobs were adding to the History
panel, then they shows "job is currently running" immediately,. However,
the jobs isn't running at all actually, ps PID shows that those jobs have
not been running for a second. The process is wait there forever. What is
stranger, after I shut down the galaxy for a restart, the process start to
run quickly, and the results of sample running are perfect. I think that is
probably caused the misconfiguration of galaxy job scheduler, but I still
can't figure out the reason by myself after several days trying. Do you
have any idea about such a problem? Thanks!