Hi all
I am due to give galaxy training tomorrow and the Galaxy server has gone down. Our galaxy admin is travelling and not responding and I appreciate a quick response to this issue.
When I run galaxy_restart.sh I get the following error in web0.pid:
migrate.versioning.repository DEBUG 2015-10-28 23:07:47,285 Config: {'db_settings': {'__name__': 'db_settings', 'required_dbs': '[]', 'version_table': 'migrate_version', 'repository_id': 'Galaxy'}}
lib/galaxy/model/migrate
galaxy.model.migrate.check DEBUG 2015-10-28 23:07:47,296 psycopg2 egg successfully loaded for postgresql dialect
Traceback (most recent call last):
File "/home/galaxy/galaxy-dist/lib/galaxy/webapps/galaxy/buildapp.py", line 35, in app_factory
app = UniverseApplication( global_conf = global_conf, **kwargs )
File "/home/galaxy/galaxy-dist/lib/galaxy/app.py", line 52, in __init__
create_or_verify_database( db_url, kwargs.get( 'global_conf', {} ).get( '__file__', None ), self.config.database_engine_options, app=self )
File "/home/galaxy/galaxy-dist/lib/galaxy/model/migrate/check.py", line 104, in create_or_verify_database
% ( db_schema.version, migrate_repository.versions.latest, config_arg ) )
Exception: Your database has version '124' but this code expects version '115'. Please backup your database and then migrate the schema by running 'sh manage_db.sh upgrade'.
------
I did then try to do sh manage_db.sh downgrade 115 but I got this error:
Traceback (most recent call last):
File "./scripts/manage_db.py", line 62, in <module>
main( repository=repo, url=db_url )
File "/home/galaxy/galaxy-dist/eggs/sqlalchemy_migrate-0.7.2-py2.6.egg/migrate/versioning/shell.py", line 207, in main
ret = command_func(**kwargs)
File "/home/galaxy/galaxy-dist/eggs/sqlalchemy_migrate-0.7.2-py2.6.egg/migrate/versioning/api.py", line 202, in downgrade
return _migrate(url, repository, version, upgrade=False, err=err, **opts)
File "<string>", line 2, in _migrate
File "/home/galaxy/galaxy-dist/eggs/sqlalchemy_migrate-0.7.2-py2.6.egg/migrate/versioning/util/__init__.py", line 159, in with_engine
return f(*a, **kw)
File "/home/galaxy/galaxy-dist/eggs/sqlalchemy_migrate-0.7.2-py2.6.egg/migrate/versioning/api.py", line 345, in _migrate
changeset = schema.changeset(version)
File "/home/galaxy/galaxy-dist/eggs/sqlalchemy_migrate-0.7.2-py2.6.egg/migrate/versioning/schema.py", line 80, in changeset
changeset = self.repository.changeset(database, start_ver, version)
File "/home/galaxy/galaxy-dist/eggs/sqlalchemy_migrate-0.7.2-py2.6.egg/migrate/versioning/repository.py", line 225, in changeset
changes = [self.version(v).script(database, op) for v in versions]
File "/home/galaxy/galaxy-dist/eggs/sqlalchemy_migrate-0.7.2-py2.6.egg/migrate/versioning/repository.py", line 189, in version
return self.versions.version(*p, **k)
File "/home/galaxy/galaxy-dist/eggs/sqlalchemy_migrate-0.7.2-py2.6.egg/migrate/versioning/version.py", line 140, in version
return self.versions[VerNum(vernum)]
KeyError: <VerNum(124)>
Any help asap will be greatly appreciated.
Ali
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