Dear all,
I installed Galaxy last week on our server following the tutorial on Admin/GetGalaxy from the wiki. I had no problem and it was running fine. However, as one of my colleague required the localhost:8080, I had to change the port number. I followed the tutorial on the wiki « Running galaxy in a production environment ». I copied the galaxy.ini.sample, modified the port and also the additional parameters as suggested. Since then, I get an error message stating that "socket.error: [Errno 98] Address already in use ». I checked and the port is free. I copy at the end of this message part of the standard and error output, hoping this could help figuring out what the problem is. Additionally I noticed that there was another warning, right at the beginning, when running the run.sh script: /data/database/galaxy-dist/eggs/pysam-0.4.2_kanwei_b10f6e722e9a-py2.6-linux-x86_64-ucs4.egg/pysam/__init__.py:1: RuntimeWarning: __builtin__.file size changed, may indicate binary incompatibility
I have checked on previous messages to see if someone had the same problem but usually it seemed that only changing the port in config/galaxy.ini worked.
Thanks a lot in advance, I am newbie and am a bit puzzled on that one, Emilie
Starting server in PID 27030. Traceback (most recent call last): File "./scripts/paster.py", line 33, in <module> serve.run() File "/data/database/galaxy-dist/lib/galaxy/util/pastescript/serve.py", line 1049, in run invoke(command, command_name, options, args[1:]) File "/data/database/galaxy-dist/lib/galaxy/util/pastescript/serve.py", line 1055, in invoke exit_code = runner.run(args) File "/data/database/galaxy-dist/lib/galaxy/util/pastescript/serve.py", line 220, in run result = self.command() File "/data/database/galaxy-dist/lib/galaxy/util/pastescript/serve.py", line 670, in command serve() File "/data/database/galaxy-dist/lib/galaxy/util/pastescript/serve.py", line 654, in serve server(app) File "/data/database/galaxy-dist/lib/galaxy/util/pastescript/loadwsgi.py", line 292, in server_wrapper **context.local_conf) File "/data/database/galaxy-dist/lib/galaxy/util/pastescript/loadwsgi.py", line 97, in fix_call val = callable(*args, **kw) File "/data/database/galaxy-dist/eggs/Paste-1.7.5.1-py2.6.egg/paste/httpserver.py", line 1342, in server_runner serve(wsgi_app, **kwargs) File "/data/database/galaxy-dist/eggs/Paste-1.7.5.1-py2.6.egg/paste/httpserver.py", line 1291, in serve request_queue_size=request_queue_size) File "/data/database/galaxy-dist/eggs/Paste-1.7.5.1-py2.6.egg/paste/httpserver.py", line 1134, in __init__ request_queue_size=request_queue_size) File "/data/database/galaxy-dist/eggs/Paste-1.7.5.1-py2.6.egg/paste/httpserver.py", line 1113, in __init__ request_queue_size=request_queue_size) File "/data/database/galaxy-dist/eggs/Paste-1.7.5.1-py2.6.egg/paste/httpserver.py", line 360, in __init__ HTTPServer.__init__(self, server_address, RequestHandlerClass) File "/usr/lib64/python2.6/SocketServer.py", line 412, in __init__ self.server_bind() File "/usr/lib64/python2.6/BaseHTTPServer.py", line 108, in server_bind SocketServer.TCPServer.server_bind(self) File "/usr/lib64/python2.6/SocketServer.py", line 423, in server_bind self.socket.bind(self.server_address) File "<string>", line 1, in bind socket.error: [Errno 98] Address already in use