Hello Mélanie, I am sorry about that. There was a bug with multiple input data parameters when nested inside a conditional the way one of your tools works. I think Peter reported this to Trello a while ago - but your workflow really helped me track down the problem - so thanks a lot! I have opened a pull request to fix this in galaxy-central's stable branch (https://bitbucket.org/galaxy/galaxy-central/pull-request/373/bugfix-for-mult...). The patch is very minor. Thanks again! -John On Tue, Apr 15, 2014 at 9:17 AM, Mélanie Hachet <mhachet@versailles.inra.fr> wrote:

Hello,

I would like to report a bug. I'm using galaxy in local and I was detected this bug 2 months ago.

First, several inputs are necessary for a box (tool) in order to create a workflow. Then, the workflow is saved with several links for one box. So I launched the workflow but i can put only one input. When I looked the workflow, only one link is kept (the last one marked), others aren't kept. However the script corresponding to the box run well independently.

If you need any further information, feel free to contact me.

Best regards.

Mélanie Hachet

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