Hi all
I'd be interested to hear comments/advice on how to best deploy Galaxy locally with the following requirements:
1) Need to keep it in sync with central source repository. Or are there "stable releases" I should be using? I'm just updating from the svn tree. 2) Need to add own tools, data formats, tests etc. I have currently created my own repository which mirrors the galaxy structure. I then link to these files from the Galaxy folders. Tedious.
Even just descriptions of your own setups (and problems) would help.
thanks in advance!
One idea is to use the hg repository instead of the svn repository (now just a mirror of svn). Because hg is decentralized, it is much easier to maintain your own local repository. You can version control your local modifications, and occasionally pull changes from galaxy- central.
-- jt
On Feb 16, 2009, at 11:52 AM, Ayton Meintjes wrote:
Hi all
I'd be interested to hear comments/advice on how to best deploy Galaxy locally with the following requirements:
- Need to keep it in sync with central source repository. Or are
there "stable releases" I should be using? I'm just updating from the svn tree. 2) Need to add own tools, data formats, tests etc. I have currently created my own repository which mirrors the galaxy structure. I then link to these files from the Galaxy folders. Tedious.
Even just descriptions of your own setups (and problems) would help.
thanks in advance! _______________________________________________ galaxy-dev mailing list galaxy-dev@bx.psu.edu http://mail.bx.psu.edu/cgi-bin/mailman/listinfo/galaxy-dev
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