You're right -- the EMBOSS version supported by the Galaxy
currently EMBOSS 5. We do have a Tool Dependency page here:
unfortunately while it lists versions for many tools it doesn't cover them
all. I'll update the EMBOSS entry.
Thanks. After a bit more looking around, I also found the version in the tool_conf.xml
file, which confirmed I need to install EMBOSS 5.0.0.
As far as updating the galaxy EMBOSS wrappers to use a newer version, I'm
not aware of any plans to do this currently (though someone could
certainly do this if so inclined).
We may do this ourselves, and contribute the updates. First we'll get it all rolled
out with EMBOSS 5. Later on I may be back in touch about how we can contribute updates
into the Galaxy mainline.
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