I have some questions about installing data onto my Ubuntu linux box. Mainly
genomic data that can be used by the extract_genomic_dna.py script. I have
done some attempts to get this working but now I'm quite stuck. First I
downloaded this data from the UCSC ftp site. (
to be precise).
Then I added the following line to "faseq.loc" as instructed: "hg18
After this I restarted the galaxy deamon but nothing seems to have happened.
I have the idea that I am missing certain steps.
The ultimate goal is to get a local galaxy install working like the one on "
The wiki is helpful to install new tools and to get an idea of how stuff
works but sparsely mentions data integration. Except for MAFs which I tried
as well. I'm now building an index for these .maf files which I assume will
take quite some time.
I hope you can help me out a bit.
Thanks in advance,