On Aug 6, 2010, at 9:07 AM, Davide Cittaro wrote:

Hi there, I may need some help in debugging this:

Forget it, please... Apparently display_as can't work with generic "interval" files. If I convert them to bed it works... Is this a bug or a feature?

d

I have added some files to a library, say foo.bed. I've changed (as admin) the name from "foo.bed" to "the foo dataset". I've imported this into my current history and if I try to visualize this bed file on the genome browser, I get this error:

http://host001.instruments.ifom-ieo-campus.it:8080/root/display_as?id=213&am...: 404 Not Found

(host001 is the galaxy server). If I download "the foo dataset" and reupload it to galaxy, the "display_as" doesn't work (same error). Strange enough, if I import a bed file from the genome browser (say some chrom.refseq.bed) I can visualize it back (so "display_as" is working). No strange logs...

d /* Davide Cittaro

Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy

tel.: +39(02)574303007 e-mail: davide.cittaro@ifom-ieo-campus.it */

---

galaxy-dev mailing list galaxy-dev@lists.bx.psu.edu http://lists.bx.psu.edu/listinfo/galaxy-dev

/* Davide Cittaro

Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy

tel.: +39(02)574303007 e-mail: davide.cittaro@ifom-ieo-campus.it */