Re: [galaxy-dev] Fresh install has wrong layout (From galaxy-user)
Hi Chris, Sorry about missing the reply, I was on vacation when you wrote back. Also, I've moved this over to the dev mailing list since it's regarding local installation issues. Could you do the following: Paste the <iframe> tags from "View Source" on the main page. Paste the log output from the server (or paster.log if you're running as a daemon) of your client connecting to Galaxy. Thanks, --nate Chris Cole wrote:
Just realised I'd not sent this to the list. Whoops!
This is still broken, anyone have any ideas? Cheers,
Chris
-------- Original Message -------- Subject: Re: [galaxy-user] Fresh install has wrong layout Date: Tue, 21 Jul 2009 10:47:50 +0100 From: Chris Cole <chris@compbio.dundee.ac.uk> Organisation: University of Dundee To: Nate Coraor <nate@bx.psu.edu> References: <4A4E147C.6010107@compbio.dundee.ac.uk> <4A4E1506.5030609@bx.psu.edu> <4A4E1716.2070800@compbio.dundee.ac.uk> <4A52AFFA.5020102@bx.psu.edu>
Hi Nate,
Sorry for not replying earlier, I've been on holiday. Attached should be my universe_wsgi.ini for the updated server. (The file has a .txt extension to avoid sending blockage).
I've used the same settings (where applicable) for my currently working svn version 1686.
Chris
Nate Coraor wrote:
Chris,
Could you send us your universe_wsgi.ini? We haven't seen this happen without a proxy before.
--nate
Chris Cole wrote:
Hi Nate,
Nope. There's no proxy configured. The only things I changed in the HTTP config part of the universe_wsgi.ini are the host and the port. Cheers,
Chris
Nate Coraor wrote:
Hi Chris,
It sounds like you maybe be running through a proxy, away from the server root, without the proxy-prefix option set in universe_wsgi.ini? If so, have a look at the documentation here:
http://g2.trac.bx.psu.edu/wiki/HowToInstall/ApacheProxy#Apacheconfigurationw...
--nate
Chris Cole wrote:
Hi,
I've been using the subversion version of Galaxy for a while, but now I want to update to the latest mercurial release.
I installed it in a new location as per the wiki and set-up the SGE settings as per my previous install and all the tests pass. It launches fine, but when viewing the website the frames seem to be off-by-one. i.e., the 'Tools' frame is empty except for "This link may not be followed from within Galaxy.", the tools are in the middle window and the 'History' frame has general information.
I can't see any errors in the paster.log file, so where can I look to sort out this error? Thanks,
Chris _______________________________________________ galaxy-user mailing list galaxy-user@bx.psu.edu http://mail.bx.psu.edu/cgi-bin/mailman/listinfo/galaxy-user
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_______________________________________________ galaxy-user mailing list galaxy-user@bx.psu.edu http://mail.bx.psu.edu/cgi-bin/mailman/listinfo/galaxy-user
Hi, As is always the case it's now working! I've not done anything to it other than ignore it for a while... Anyway thanks for the positive karma ;) Chris Nate Coraor wrote:
Hi Chris,
Sorry about missing the reply, I was on vacation when you wrote back. Also, I've moved this over to the dev mailing list since it's regarding local installation issues.
Could you do the following:
Paste the <iframe> tags from "View Source" on the main page.
Paste the log output from the server (or paster.log if you're running as a daemon) of your client connecting to Galaxy.
Thanks, --nate
Chris Cole wrote:
Just realised I'd not sent this to the list. Whoops!
This is still broken, anyone have any ideas? Cheers,
Chris
-------- Original Message -------- Subject: Re: [galaxy-user] Fresh install has wrong layout Date: Tue, 21 Jul 2009 10:47:50 +0100 From: Chris Cole <chris@compbio.dundee.ac.uk> Organisation: University of Dundee To: Nate Coraor <nate@bx.psu.edu> References: <4A4E147C.6010107@compbio.dundee.ac.uk> <4A4E1506.5030609@bx.psu.edu> <4A4E1716.2070800@compbio.dundee.ac.uk> <4A52AFFA.5020102@bx.psu.edu>
Hi Nate,
Sorry for not replying earlier, I've been on holiday. Attached should be my universe_wsgi.ini for the updated server. (The file has a .txt extension to avoid sending blockage).
I've used the same settings (where applicable) for my currently working svn version 1686.
Chris
Nate Coraor wrote:
Chris,
Could you send us your universe_wsgi.ini? We haven't seen this happen without a proxy before.
--nate
Chris Cole wrote:
Hi Nate,
Nope. There's no proxy configured. The only things I changed in the HTTP config part of the universe_wsgi.ini are the host and the port. Cheers,
Chris
Nate Coraor wrote:
Hi Chris,
It sounds like you maybe be running through a proxy, away from the server root, without the proxy-prefix option set in universe_wsgi.ini? If so, have a look at the documentation here:
http://g2.trac.bx.psu.edu/wiki/HowToInstall/ApacheProxy#Apacheconfigurationw...
--nate
Chris Cole wrote:
Hi,
I've been using the subversion version of Galaxy for a while, but now I want to update to the latest mercurial release.
I installed it in a new location as per the wiki and set-up the SGE settings as per my previous install and all the tests pass. It launches fine, but when viewing the website the frames seem to be off-by-one. i.e., the 'Tools' frame is empty except for "This link may not be followed from within Galaxy.", the tools are in the middle window and the 'History' frame has general information.
I can't see any errors in the paster.log file, so where can I look to sort out this error? Thanks,
Chris _______________________________________________ galaxy-user mailing list galaxy-user@bx.psu.edu http://mail.bx.psu.edu/cgi-bin/mailman/listinfo/galaxy-user
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_______________________________________________ galaxy-user mailing list galaxy-user@bx.psu.edu http://mail.bx.psu.edu/cgi-bin/mailman/listinfo/galaxy-user
participants (2)
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Chris Cole -
Nate Coraor