This patch has been applied to galaxy-central in changeset 4361:ddf70ed04c8b thanks rc On Sep 29, 2010, at 7:41 AM, Peter wrote:

Hi all,

This trivial patch makes it explicit that the sff_extract tool converts from SFF to Sanger FASTQ files:

http://bitbucket.org/peterjc/galaxy-central/changeset/1c65fc26f05f

I'm assuming here that datatype "fastq" in Galaxy is a legacy entry and/or only used when the FASTQ variant is unknown.

Regards,

Peter _______________________________________________ galaxy-dev mailing list galaxy-dev@lists.bx.psu.edu http://lists.bx.psu.edu/listinfo/galaxy-dev