Hi, I've put the executable in the directory where the xml file and wrapper is. The message I'm getting when I run the tool is Unable to run tool: No such file or directory. I guess that I'm forgetting something.... > Subject: Re: [galaxy-user] Upload executable in galaxy > From: nate(a)bx.psu.edu > Date: Mon, 28 Nov 2011 13:40:24 -0500 > CC: galaxy-dev(a)bx.psu.edu > To: giota_kottara(a)hotmail.com > > On Nov 23, 2011, at 11:10 AM, Giota Kottara wrote: > > > Dear galaxy developers, > > > > I am trying to integrate an executable tool in a private instance of galaxy. I stored the configuration .xml file and the executable in tools folder of Galaxy and the tool appears in the homepage. Nevertheless when i am running the tool it doesn't seem to find the executable. Am I forgetting something? > > Hi Giota, > > I've moved this over to the galaxy-dev list since it pertains to tool development. > > Executables will need to be on the $PATH of the user running Galaxy. Could you share the error messages you receive when you run the tool? > > --nate > > > > > Thank you in advance > > Giota Kottara > > ___________________________________________________________ > > The Galaxy User list should be used for the discussion of > > Galaxy analysis and other features on the public server > > at usegalaxy.org. Please keep all replies on the list by > > using "reply all" in your mail client. For discussion of > > local Galaxy instances and the Galaxy source code, please > > use the Galaxy Development list: > > > > http://lists.bx.psu.edu/listinfo/galaxy-dev > > > > To manage your subscriptions to this and other Galaxy lists, > > please use the interface at: > > > > http://lists.bx.psu.edu/ >