Hi,
I tried to visualize a BAM file with Trackster. After adding a custom genome build, I always get an error message when Galaxy needs to access http://127.0.0.1:8081/user/dbkeys:
Internal Server Error Galaxy was unable to sucessfully complete your request
URL: http://127.0.0.1:8081/user/dbkeys Module galaxy.web.framework.middleware.error:149 in __call__
app_iter = self.application(environ, sr_checker)
Module paste.recursive:84 in __call__
return self.application(environ, start_response)
Module paste.httpexceptions:633 in __call__
return self.application(environ, start_response)
Module galaxy.web.framework.base:132 in __call__
return self.handle_request( environ, start_response )
Module galaxy.web.framework.base:190 in handle_request
body = method( trans, **kwargs )
Module galaxy.web.framework:98 in decorator
return func( self, trans, *args, **kwargs )
Module galaxy.webapps.galaxy.controllers.user:1334 in dbkeys
len_dataset = fasta_dataset.get_converted_dataset( trans, "len" )
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:216 in execute
chrom_info = build_fasta_dataset.get_converted_dataset( trans, 'len' ).file_name
Module galaxy.model:1340 in get_converted_dataset
new_dataset = self.datatype.convert_dataset( trans, self, target_ext, return_output=True, visible=False, deps=deps, set_output_history=False ).values()[0]
Module galaxy.datatypes.data:488 in convert_dataset
converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1]
Module galaxy.tools:2275 in execute
return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history, **kwargs )
Module galaxy.tools.actions:204 in execute
db_dataset = trans.db_dataset_for( input_dbkey )
Module galaxy.web.framework:1082 in db_dataset_for
for ds in datasets:
Module sqlalchemy.orm.query:2227 in __iter__
return self._execute_and_instances(context)
Module sqlalchemy.orm.query:2242 in _execute_and_instances
result = conn.execute(querycontext.statement, self._params)
Module sqlalchemy.engine.base:1449 in execute
params)
Module sqlalchemy.engine.base:1576 in _execute_clauseelement
inline=len(distilled_params) > 1)
Module sqlalchemy.sql.expression:1778 in compile Module sqlalchemy.sql.expression:1784 in _compiler Module sqlalchemy.sql.compiler:276 in __init__ Module sqlalchemy.engine.base:705 in __init__
self.string = self.process(self.statement)
Module sqlalchemy.engine.base:724 in process
return obj._compiler_dispatch(self, **kwargs)
Module sqlalchemy.sql.visitors:72 in _compiler_dispatch Module sqlalchemy.sql.compiler:997 in visit_select Module sqlalchemy.sql.visitors:72 in _compiler_dispatch Module sqlalchemy.sql.compiler:498 in visit_clauselist Module sqlalchemy.sql.compiler:496 in <genexpr> Module sqlalchemy.sql.compiler:498 in <genexpr> Module sqlalchemy.sql.visitors:72 in _compiler_dispatch Module sqlalchemy.sql.compiler:618 in visit_binary Module sqlalchemy.sql.compiler:663 in _operator_dispatch Module sqlalchemy.sql.compiler:617 in <lambda> Module sqlalchemy.sql.visitors:72 in _compiler_dispatch Module sqlalchemy.sql.compiler:679 in visit_bindparam Module sqlalchemy.sql.compiler:743 in _truncate_bindparam Module sqlalchemy.sql.compiler:754 in _truncated_identifier Module sqlalchemy.sql.expression:1325 in apply_map Module sqlalchemy.util._collections:572 in __missing__ Module sqlalchemy.sql.compiler:773 in _process_anon RuntimeError: maximum recursion depth exceeded while calling a Python object
Do you have an idea what causes this error? Is there a way to purge the dbkeys database?
Thank you Christian
Internal Server Error Galaxy was unable to sucessfully complete your request
URL: http://127.0.0.1:8081/user/dbkeys Module galaxy.web.framework.middleware.error:149 in __call__
app_iter = self.application(environ, sr_checker)
Module paste.recursive:84 in __call__
return self.application(environ, start_response)
Module paste.httpexceptions:633 in __call__
return self.application(environ, start_response)
Module galaxy.web.framework.base:132 in __call__
return self.handle_request( environ, start_response )
Module galaxy.web.framework.base:190 in handle_request
body = method( trans, **kwargs )
Module galaxy.web.framework:98 in decorator
return func( self, trans, *args, **kwargs )
Do you have an idea what causes this error?
There are sporadic reports of this issue, but I haven't been able to reproduce it. My best guess is that it's due to trying to use the custom build before Galaxy has finished creating it. To ensure that the custom build is ready for use, make sure to wait for Galaxy to show the number of chromosomes rather than '?' on the custom builds page.
Is there a way to purge the dbkeys database?
Does deleting the custom build work? If not, you can remove a user's custom dbkeys from the database using this SQL command:
delete from user_preference where user_id=(select id from galaxy_user where email='<user_email>') and name='dbkeys';
Best, J.
On 22.08.2013, at 19:50, Jeremy Goecks wrote:
Internal Server Error Galaxy was unable to sucessfully complete your request
URL: http://127.0.0.1:8081/user/dbkeys Module galaxy.web.framework.middleware.error:149 in __call__
app_iter = self.application(environ, sr_checker)
Module paste.recursive:84 in __call__
return self.application(environ, start_response)
Module paste.httpexceptions:633 in __call__
return self.application(environ, start_response)
Module galaxy.web.framework.base:132 in __call__
return self.handle_request( environ, start_response )
Module galaxy.web.framework.base:190 in handle_request
body = method( trans, **kwargs )
Module galaxy.web.framework:98 in decorator
return func( self, trans, *args, **kwargs )
Do you have an idea what causes this error?
There are sporadic reports of this issue, but I haven't been able to reproduce it. My best guess is that it's due to trying to use the custom build before Galaxy has finished creating it. To ensure that the custom build is ready for use, make sure to wait for Galaxy to show the number of chromosomes rather than '?' on the custom builds page.
It also sometimes happens when I create and share a Trackster visualization. I can access the visualization without problem whereas the users I shared it with can't access it because of the mentioned error or they get a message like "Can't load dbkey".
Is there a way to purge the dbkeys database?
Does deleting the custom build work? If not, you can remove a user's custom dbkeys from the database using this SQL command:
Unfortunately Galaxy won't let go to the custom builds page and will show error message instead.
delete from user_preference where user_id=(select id from galaxy_user where email='<user_email>') and name='dbkeys';
Thanks, I will try that.
Best, J.
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There are sporadic reports of this issue, but I haven't been able to reproduce it. My best guess is that it's due to trying to use the custom build before Galaxy has finished creating it. To ensure that the custom build is ready for use, make sure to wait for Galaxy to show the number of chromosomes rather than '?' on the custom builds page.
It also sometimes happens when I create and share a Trackster visualization. I can access the visualization without problem whereas the users I shared it with can't access it because of the mentioned error or they get a message like "Can't load dbkey".
"Can't load dbkey" is a different issue than the server error. If you can provide datasets and/or steps to reproduce either issue, I'm confident that they could be fixed.
Thanks, J.
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