Dear all,

I've been trying to properly install the "BAMTools split" tool in our local DKFZ-Galaxy instance, but it doesn't work properly.

The strange thing is that you can launch a bamtools splitter job on our cluster, but it never shows up in the history...until it fails with following

"error":

"tool error

An error occurred with this dataset: Unable to finish job"

All versions (Galaxy, bamtools 2.4.0,samtools 1.3.1) are up to date and this is what I installed:

Repository bamtools_split Name: bamtools_split Owner: devteam Synopsis: Tool for splitting BAM files Detailed description: Utility for splitting BAM files. It is based on BAMtools suite of tools by Derek Barnett. Content homepage: https://github.com/pezmaster31/bamtools

Development repository: https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/...

Revision: 2:e2c1b62e1db1

Thanks and best regards,

Christopher