On Jun 3, 2013, at 10:13 AM, Ramon Tiburski wrote:

I have a problem with a tool in R. I can't load the RPostgreSQL library that I get the following error:

ERROR: carregando pacotes exigidos: dbi

My xml is this:

<command interpreter="bash">r_wrapper.sh $script_file</command>

<configfiles> <configfile name="script_file"> library(RPostgreSQL) ... </configfile> </configfiles>

I have this library installed at my system, what can I do?

Hi Ramon, Have you checked to make sure that the user that Galaxy runs as is able to find the library? Is it possible that it is installed for a single user or in a non-standard path that has not been configured for the Galaxy user? Does the script work if run directly on the command line as the Galaxy user? --nate

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