How to transfer or upload datasets to Galaxy server automatically?
Hello, Galaxy developers and maintainers! I'm a user in Chinese mainland and I'd like to deploy our Galaxy server locally. There's some requirements I cannot realize and I still have no idea after searching over all Galaxy Wiki pages and Galaxy Developer docs. The problem is, I need to jump from another external webpage to Galaxy index page through a JS action and a specific included dataset has to be transferred to Galaxy at the same time. In other words, users click a button on an external webpage and will transfer to Galaxy index page with an automatic action of user-login and dataset-uploading in Galaxy server. I've no idea how to realize someway and really need some help on it. Thanks Wang Dan
You can probably use the API for what you want to do, though your users will need to have an API key to make everything work smoothly. Documentation for the API is here: https://galaxy-central.readthedocs.org/en/latest/lib/galaxy.webapps.galaxy.a... An alternative approach would be to build a Galaxy data source tool that enables users to get a remote dataset from your site. Here are some information about this approach: http://wiki.galaxyproject.org/Admin/Internals/Data%20Sources Also, check out examples in the <GALAXY_HOME>/tools/data_source directory. Good luck, J. On May 7, 2013, at 10:54 PM, 王聃Don wrote:
Hello, Galaxy developers and maintainers! I'm a user in Chinese mainland and I'd like to deploy our Galaxy server locally. There's some requirements I cannot realize and I still have no idea after searching over all Galaxy Wiki pages and Galaxy Developer docs. The problem is, I need to jump from another external webpage to Galaxy index page through a JS action and a specific included dataset has to be transferred to Galaxy at the same time. In other words, users click a button on an external webpage and will transfer to Galaxy index page with an automatic action of user-login and dataset-uploading in Galaxy server. I've no idea how to realize someway and really need some help on it. Thanks Wang Dan
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participants (2)
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Jeremy Goecks
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王聃Don