Hi,

On 21.05.2013 18:06, Dannon Baker wrote:

This interaction is pretty clunky right now (I've made a trello card for improving it: https://trello.com/c/eu8XiJLK.

Two options right now are:

1. Import (on main) each workflow you want to copy to your local instance, and generate the regular

download link for import. (Download or Export in the workflow menu, once you've imported it)

I wanted to avoid that since I have to import more then one workflow.

2. Munge the URLs yourself -- all accessible workflows are available for download via

https://main.g2.bx.psu.edu/workflow/export_to_file?id=<workflow_id>

But how do I get the workflow_id? For example for the workflow https://main.g2.bx.psu.edu/u/gm2123/w/cloudmap-unmapped-mutant-workflow-no-c...

what would the workflow_id be? (I tried "cloudmap-unmapped-mutant-workflow-no-candidates" but this did not work.)

regards, Andreas

-Dannon

On Tue, May 21, 2013 at 11:56 AM, Andreas Kuntzagk <andreas.kuntzagk@mdc-berlin.de mailto:andreas.kuntzagk@mdc-berlin.de> wrote:

Hi,

I want to make workflows published on usegalaxy.org <http://usegalaxy.org> available for users
on our local instance. How do I do this?

regards, Andreas

--
Andreas Kuntzagk

SystemAdministrator

Berlin Institute for Medical Systems Biology at the
Max-Delbrueck-Center for Molecular Medicine
Robert-Roessle-Str. 10, 13125 Berlin, Germany

http://www.mdc-berlin.de/en/__bimsb/BIMSB_groups/Dieterich
<http://www.mdc-berlin.de/en/bimsb/BIMSB_groups/Dieterich>
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For the first of the CloudMap workflows that worked. But the second failes with this error message:

Failed to open URL: https://main.g2.bx.psu.edu/workflow/export_to_file?id=f444ce954bdc4953 Exception: HTTP Error 500: Internal Server Error

I don't see any information in the log files.

regards, Andreas

On 22.05.2013 13:57, Dannon Baker wrote:

On Wed, May 22, 2013 at 3:12 AM, Andreas Kuntzagk <andreas.kuntzagk@mdc-berlin.de mailto:andreas.kuntzagk@mdc-berlin.de> wrote:

But how do I get the workflow_id? For example for the workflow
https://main.g2.bx.psu.edu/u/__gm2123/w/cloudmap-unmapped-__mutant-workflow-no-candidates
<https://main.g2.bx.psu.edu/u/gm2123/w/cloudmap-unmapped-mutant-workflow-no-candidates>

what would the workflow_id be?
(I tried "cloudmap-unmapped-mutant-__workflow-no-candidates" but this did not work.)

If you click on that link above, you can see the id in the url for the 'Import' link. Again, definitely not optimal -- public workflows should probably all be exposed via the API for use/import.