For general galaxy output, I need to define sth like
<data format="input" name="out_file1"
and put $out_file1 as a parameter in the command tag.
To my understanding, Galaxy will save the $out_file1 into a file and
retrieve and display it on the result panel.
I have a *.pl file which takes inputs and generate a file (result.txt) in
my local server and return a file path. Can I redirect the galaxy output
to this file?
Currently, I am reading the file using the file path and push the content
in the file into $out_file1. For large files, it is a waste of computing
time and resource (since Galaxy will generate another file).
Is there a solution for this?
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