Hi Martin, It’s 15.03. Regards, Dineli From: Martin Čech [mailto:marten@bx.psu.edu] Sent: Tuesday, September 13, 2016 10:31 PM To: Amarathunga A. Dineli Karunath; galaxy-dev@bx.psu.edu Subject: Re: [galaxy-dev] Trimmomatic tool is not visible in the workflow editor Hi Dineli, what version of Galaxy do you have installed? thanks Martin On Tue, Sep 13, 2016 at 10:27 AM Amarathunga A. Dineli Karunath <dineli_karunathilaka@nuhs.edu.sg<mailto:dineli_karunathilaka@nuhs.edu.sg>> wrote: Hi, I have a local galaxy instance and have installed many tools from the galaxy tool shed. Recently I have installed Trimmomatic tool and installation was successful but when I go to build a workflow, trimmomatic tool is not visible in the tool panel. It works fine in all other places. Could you please help me on this? Please refer the attachments I have provided. Thanks & Regards, Dineli ________________________________ Important: This email is confidential and may be privileged. If you are not the intended recipient, please delete it and notify us immediately; you should not copy or use it for any purpose, nor disclose its contents to any other person. Thank you. ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/ ________________________________ Important: This email is confidential and may be privileged. If you are not the intended recipient, please delete it and notify us immediately; you should not copy or use it for any purpose, nor disclose its contents to any other person. Thank you.

I have installed Galaxy using this link : https://bitbucket.org/apetkau/galaxy-dist/get/b065a7a.tar.gz I’m using Galaxy along with an open source project so this instance is built specifically for that project I guess. In that case do you know how I should update it? Thanks, Dineli From: Martin Čech [mailto:marten@bx.psu.edu] Sent: Wednesday, September 14, 2016 10:15 AM To: Amarathunga A. Dineli Karunath; galaxy-dev@bx.psu.edu Subject: Re: [galaxy-dev] Trimmomatic tool is not visible in the workflow editor I think you might need to update since I believe the trimmomatic tool uses features that are not available in the 15.03 Galaxy workflow editor/engine. M. On Tue, Sep 13, 2016, 21:45 Amarathunga A. Dineli Karunath <dineli_karunathilaka@nuhs.edu.sg<mailto:dineli_karunathilaka@nuhs.edu.sg>> wrote: Hi Martin, It’s 15.03. Regards, Dineli From: Martin Čech [mailto:marten@bx.psu.edu<mailto:marten@bx.psu.edu>] Sent: Tuesday, September 13, 2016 10:31 PM To: Amarathunga A. Dineli Karunath; galaxy-dev@bx.psu.edu<mailto:galaxy-dev@bx.psu.edu> Subject: Re: [galaxy-dev] Trimmomatic tool is not visible in the workflow editor Hi Dineli, what version of Galaxy do you have installed? thanks Martin On Tue, Sep 13, 2016 at 10:27 AM Amarathunga A. Dineli Karunath <dineli_karunathilaka@nuhs.edu.sg<mailto:dineli_karunathilaka@nuhs.edu.sg>> wrote: Hi, I have a local galaxy instance and have installed many tools from the galaxy tool shed. Recently I have installed Trimmomatic tool and installation was successful but when I go to build a workflow, trimmomatic tool is not visible in the tool panel. It works fine in all other places. Could you please help me on this? Please refer the attachments I have provided. Thanks & Regards, Dineli ________________________________ Important: This email is confidential and may be privileged. If you are not the intended recipient, please delete it and notify us immediately; you should not copy or use it for any purpose, nor disclose its contents to any other person. Thank you. ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/ ________________________________ Important: This email is confidential and may be privileged. If you are not the intended recipient, please delete it and notify us immediately; you should not copy or use it for any purpose, nor disclose its contents to any other person. Thank you. ________________________________ Important: This email is confidential and may be privileged. If you are not the intended recipient, please delete it and notify us immediately; you should not copy or use it for any purpose, nor disclose its contents to any other person. Thank you.