If you are looking for a simple python program to log cpu% and memory of another executable, then analyze.py might do. Its in https://github.com/Public-Health-Bioinformatics/kipper/tree/master/RDP-test -case along with a few scripts that show examples of its use. Damion >> >> On 02/21/2016 11:13 PM, Peter van Heusden wrote: >> >> Hi there >> >> We're researching the resource (CPU time and memory) requirements for >>RNA >> STAR at the moment. Specifically, we'd like to build up a database of >>input >> size to resource usage so that we can use this to feed a dynamic >> destination mapper (currently our STAR configuration uses a thumbsuck >>for >> RAM and CPU requirements that is not optimal but works in many cases). >> >> Has anyone collected these metrics before? And more generally, is anyone >> collecting metrics for a range of bioinformatics tools? A database like >> this could be very useful! >> >> Thanks! >> Peter >> ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/