Hi ! I have a problem when i execute BWA from my local galaxy instance. I have this error message : An error occurred running this job:*BWA Version: 0.6.1-r104 Error indexing reference sequence. [bwa_index] Pack FASTA... 2.35 sec [bwa_index] Construct BWT for the packed sequence... Segmentation fault* * * Could anyone help me to fix it thanks ! Regards Amine
Hi, Have you created the index files using the exact same version of bwa? I've had segfaults when using references indexed on a different computer running a different version. Geert On 05/28/2012 08:54 PM, CHEBBI Mohamed Amine wrote:
Hi ! I have a problem when i execute BWA from my local galaxy instance. I have this error message :
An error occurred running this job:/BWA Version: 0.6.1-r104 Error indexing reference sequence. [bwa_index] Pack FASTA... 2.35 sec [bwa_index] Construct BWT for the packed sequence... Segmentation fault/ / / Could anyone help me to fix it thanks ! Regards Amine
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participants (2)
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CHEBBI Mohamed Amine -
Geert Vandeweyer