Hello I would like to assemble my Illimuna reads along with some Sanger reads. Is Velvet or ABySS hidden somewhere in the menu? Please advise. Thanks, Gregory Thyssen, PhD Molecular Biologist Cotton Fiber Bioscience USDA-ARS-Southern Regional Research Center 1100 Robert E Lee Blvd New Orleans, LA 70124 gregory.thyssen@ars.usda.gov 504-286-4280 This electronic message contains information generated by the USDA solely for the intended recipients. Any unauthorized interception of this message or the use or disclosure of the information it contains may violate the law and subject the violator to civil or criminal penalties. If you believe you have received this message in error, please notify the sender and delete the email immediately.
Hello Gregory, The Tool Shed has some assembly tools that you would be able to use with a local or cloud instance. Please see: http://toolshed.g2.bx.psu.edu/ Under Category name: Assembly Help with the tool shed and local/cloud Galaxy instances is in our wiki: http://wiki.galaxyproject.org/Tool%20Shed http://getgalaxy.org http://usegalaxy.org/cloud Hopefully this helps to get you started, this is a good mailing list to use for follow-up questions for both the tool shed and local/cloud installs. Start a new thread when you have new questions for the best visibility. Take care, Jen Galaxy team On 11/20/12 11:53 AM, Thyssen, Gregory - ARS wrote:
Hello
I would like to assemble my Illimuna reads along with some Sanger reads.
Is Velvet or ABySS hidden somewhere in the menu?
Please advise.
Thanks,
Gregory Thyssen, PhD
Molecular Biologist
Cotton Fiber Bioscience
USDA-ARS-Southern Regional Research Center
1100 Robert E Lee Blvd
New Orleans, LA 70124
gregory.thyssen@ars.usda.gov
504-286-4280
This electronic message contains information generated by the USDA solely for the intended recipients. Any unauthorized interception of this message or the use or disclosure of the information it contains may violate the law and subject the violator to civil or criminal penalties. If you believe you have received this message in error, please notify the sender and delete the email immediately.
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Jennifer Jackson
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Thyssen, Gregory - ARS